packages/htslib
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

!1 init package

Browse Source 
From: @myeuler
Reviewed-by: 
Signed-off-by:
This commit is contained in:
openeuler-ci-bot 2020-09-22 08:52:10 +08:00 committed by Gitee
commit 10c4c2e384
2 changed files with 63 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

BIN
htslib-1.10.2.tar.gz Normal file
View File

Binary file not shown.

63
htslib.spec Normal file
View File

@ -0,0 +1,63 @@
#%global debug_package %{nil}
Name: htslib
Version: 1.10.2
Release: 1
Summary: C library for high-throughput sequencing data formats
License: MIT and BSD
URL: http://www.htslib.org
Source0: https://github.com/samtools/htslib/archive/%{name}-%{version}.tar.gz
BuildRequires: gcc autoconf automake make curl-devel zlib-devel bzip2-devel xz-devel libxcrypt-devel openssl-devel
%description
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM index, with file extension .csi (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
%package devel
Summary: libs for htslib package
Requires: %{name} = %{version}-%{release}
%description devel
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM index, with file extension .csi (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
%prep
%setup -q -n %{name}-%{version}/
%build
autoheader
autoconf
%configure --prefix=%{_prefix} --libdir=%{_libdir} --enable-gcs --enable-libcurl --enable-s3
%make_build
%install
%make_install
rm -rf %{buildroot}/%{_libdir}/libhts.a
%pre
%preun
%post
%postun
%check
%files
%license LICENSE
%doc README NEWS README.large_positions.md
%{_bindir}/*
%{_libdir}/libhts.so.*
%{_mandir}/*
%files devel
%{_libdir}/libhts.so
%{_libdir}/pkgconfig/*
%{_includedir}/*
%changelog
* Sun Mar 29 2020 Wei Xiong <myeuler@163.com>
- Package init