46 lines
1.2 KiB
RPMSpec
46 lines
1.2 KiB
RPMSpec
#%global debug_package %{nil}
|
|
|
|
Name: miniasm
|
|
Version: 0.3
|
|
Release: 1
|
|
Summary: Ultrafast de novo assembly for long noisy reads
|
|
License: MIT
|
|
URL: https://github.com/lh3/miniasm
|
|
Source0: https://github.com/lh3/miniasm/archive/%{name}-%{version}.tar.gz
|
|
|
|
BuildRequires: gcc zlib-devel
|
|
|
|
%description
|
|
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
|
|
|
|
%prep
|
|
%setup -q -n %{name}-%{version}/
|
|
|
|
%build
|
|
%make_build
|
|
|
|
%install
|
|
install -d %{buildroot}/%{_bindir}
|
|
install -d %{buildroot}/%{_mandir}/man1
|
|
install -m 755 miniasm %{buildroot}/%{_bindir}
|
|
install -m 755 minidot %{buildroot}/%{_bindir}
|
|
install -m 644 miniasm.1 %{buildroot}/%{_mandir}/man1/
|
|
|
|
%pre
|
|
%preun
|
|
%post
|
|
%postun
|
|
|
|
%check
|
|
|
|
%files
|
|
%license LICENSE.txt
|
|
%doc README.md
|
|
%{_bindir}/*
|
|
%{_mandir}/*
|
|
|
|
%changelog
|
|
* Sun Mar 29 2020 Wei Xiong <myeuler@163.com>
|
|
- Package init
|
|
|