package init

0001-nexus-fix-version-and-nxtranslate-xml.patch

@@ -0,0 +1,86 @@
+From 3563d9b37ebb3a59dd4d5ed1d82882818fd5d1ea Mon Sep 17 00:00:00 2001
+From: bzg1107 <preloyalwhite@163.com>
+Date: Wed, 28 Jul 2021 16:11:33 +0800
+Subject: [PATCH] nexus fix version and nxtranslate xml
+
+---
+ CMakeLists.txt                                          | 2 --
+ applications/NXtranslate/text_xml/xml_retriever_dom.cpp | 8 ++++----
+ applications/NXtranslate/xml_parser.cpp                 | 8 ++++----
+ 3 files changed, 8 insertions(+), 10 deletions(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 4c50538..8f8b0bd 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -69,7 +69,6 @@ endif()
+ #-----------------------------------------------------------------------------
+ set (API_VERSION_MAJOR 4)
+ set (API_VERSION_MINOR 4)
+-set (API_VERSION_PATCH 2)
+ set (API_VERSION "${API_VERSION_MAJOR}.${API_VERSION_MINOR}.${API_VERSION_PATCH}")
+ set (ABI_CURRENT 1)
+ set (ABI_REVISION 0)
+@@ -78,7 +77,6 @@ set (ABI_VERSION "${ABI_CURRENT}.${ABI_REVISION}.${ABI_AGE}")
+ 
+ set (NEXUS_VERSION_MAJOR 4)
+ set (NEXUS_VERSION_MINOR 4)
+-set (NEXUS_VERSION_PATCH 2)
+ set (NEXUS_SONAME 4)
+ set (NAPI_VERSION "${NEXUS_VERSION_MAJOR}.${NEXUS_VERSION_MINOR}.${NEXUS_VERSION_PATCH}")
+ set (NXLTVERSINFO "${NEXUS_VERSION_MAJOR}:${NEXUS_VERSION_MINOR}:${NEXUS_VERSION_PATCH}")
+diff --git a/applications/NXtranslate/text_xml/xml_retriever_dom.cpp b/applications/NXtranslate/text_xml/xml_retriever_dom.cpp
+index dcc56f4..dad5403 100644
+--- a/applications/NXtranslate/text_xml/xml_retriever_dom.cpp
++++ b/applications/NXtranslate/text_xml/xml_retriever_dom.cpp
+@@ -163,8 +163,8 @@ static void my_error(void *user_data, const char* msg, ...){
+   va_start(args,msg);
+ 
+   // get the position of the error
+-  int line=getLineNumber(context);
+-  int col =getColumnNumber(context);
++  int line=xmlSAX2GetLineNumber(context);
++  int col =xmlSAX2GetColumnNumber(context);
+ 
+   // print out the result
+   char str[70];
+@@ -186,8 +186,8 @@ static void my_fatalError(void *user_data, const char* msg, ...){
+   va_start(args,msg);
+ 
+   // get the position of the error
+-  int line=getLineNumber(context);
+-  int col =getColumnNumber(context);
++  int line=xmlSAX2GetLineNumber(context);
++  int col =xmlSAX2GetColumnNumber(context);
+ 
+   // print out the result
+   char str[70];
+diff --git a/applications/NXtranslate/xml_parser.cpp b/applications/NXtranslate/xml_parser.cpp
+index 70500a1..7457180 100644
+--- a/applications/NXtranslate/xml_parser.cpp
++++ b/applications/NXtranslate/xml_parser.cpp
+@@ -463,8 +463,8 @@ static void my_error(void *user_data, const char* msg, ...){
+   va_start(args,msg);
+ 
+   // get the position of the error
+-  int line=getLineNumber(context);
+-  int col =getColumnNumber(context);
++  int line=xmlSAX2GetLineNumber(context);
++  int col =xmlSAX2GetColumnNumber(context);
+ 
+   // print out the result
+   char str[70];
+@@ -486,8 +486,8 @@ static void my_fatalError(void *user_data, const char* msg, ...){
+   va_start(args,msg);
+ 
+   // get the position of the error
+-  int line=getLineNumber(context);
+-  int col =getColumnNumber(context);
++  int line=xmlSAX2GetLineNumber(context);
++  int col =xmlSAX2GetColumnNumber(context);
+ 
+   // print out the result
+   char str[70];
+-- 
+2.30.0
+

nexus.spec

@@ -0,0 +1,81 @@
+Name:           nexus
+Version:        4.4.3
+Release:        1
+Summary:        Libraries and tools for the NeXus scientific data file format
+# The entire source code is GPLv2+ except nxdir which is MIT
+License:        LGPLv2+ and MIT and IJG and GPLv2+ and Zlib
+URL:            http://www.nexusformat.org/
+Source0:        https://github.com/nexusformat/code/archive/v%{version}/code-v%{version}.tar.gz
+Patch0:         0001-nexus-fix-version-and-nxtranslate-xml.patch
+BuildRequires:  cmake gcc gcc-c++ hdf5-devel hdf-devel make python-docutils 
+BuildRequires:	doxygen libtirpc
+Requires:       hdf5 hdf mxml
+
+%description
+NeXus is common data format for neutron, x-ray, and muon science. This
+package provides tools and libraries for accessing these files. The on disk representation is based upon either HDF4, HDF5 or XML.
+
+%package        devel
+Summary:        Development files for %{name}
+Requires:       %{name}%{?_isa} = %{version}-%{release}
+Requires:       hdf5-devel
+Requires:       hdf-devel
+
+%description    devel
+The %{name}-devel package contains header files for
+developing applications that use %{name}
+
+%package        tools
+Summary:        Applications for reading and writing NeXus files.
+Requires:       %{name}%{?_isa} = %{version}-%{release}
+Requires:       readline
+BuildRequires:  pkgconfig(libxml-2.0)
+BuildRequires:  pkgconfig(readline)
+
+%description    tools
+%{summary}.
+
+%prep
+%autosetup -p1 -n code-%{version}
+
+%build
+%cmake \
+       -DENABLE_HDF5=1 \
+       -DENABLE_CXX=1 \
+       -DENABLE_APPS=1 .
+make %{?_smp_mflags}
+
+%install
+%make_install
+
+%files
+%license COPYING
+%doc %{_datadir}/doc/NeXus/README.doc
+%{_libdir}/lib*.so.*
+
+%files devel
+%license COPYING
+%{_includedir}/nexus/
+%{_libdir}/pkgconfig/
+%{_libdir}/lib*.so
+%{_libdir}/lib*.a
+
+%files tools
+%{_bindir}/nxbrowse
+%{_bindir}/nxconvert
+%{_bindir}/nxsummary
+%{_bindir}/nxtranslate
+%{_bindir}/nxtraverse
+%{_mandir}/man1/nxbrowse.1.gz
+%{_mandir}/man1/nxconvert.1.gz 
+%{_mandir}/man1/nxsummary.1.gz
+%license %{_datadir}/doc/NeXus/programs/nxdir/LICENSE
+%doc %{_datadir}/doc/NeXus/programs/nxdir/CHANGES
+%doc %{_datadir}/doc/NeXus/programs/nxdir/README
+%doc %{_datadir}/doc/NeXus/programs/nxdir/TODO
+%{_bindir}/nxdir
+%{_mandir}/man1/nxdir.1.gz  
+
+%changelog
+* Tue Jul 13 2021 baizhonggui <baizhonggui@huawei.com> - 4.4.3-1
+- Package init